Package: acnr 0.3.2

acnr: Annotated Copy-Number Regions

This data package provides SNP array data from different types of copy-number regions. These regions were identified manually by the authors of the package and may be used to generate realistic data sets with known truth.

Authors:Morgane Pierre-Jean and Pierre Neuvial

acnr_0.3.2.tar.gz
acnr_0.3.2.zip(r-4.5)acnr_0.3.2.zip(r-4.4)acnr_0.3.2.zip(r-4.3)
acnr_0.3.2.tgz(r-4.5-any)acnr_0.3.2.tgz(r-4.4-any)acnr_0.3.2.tgz(r-4.3-any)
acnr_0.3.2.tar.gz(r-4.5-noble)acnr_0.3.2.tar.gz(r-4.4-noble)
acnr_0.3.2.tgz(r-4.4-emscripten)acnr_0.3.2.tgz(r-4.3-emscripten)
acnr.pdf |acnr.html✨
acnr/json (API)
NEWS

# Install 'acnr' in R:
install.packages('acnr', repos = c('https://mpierrejean.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mpierrejean/acnr/issues

On CRAN:

Conda:

5.23 score 1 stars 3 packages 19 scripts 448 downloads 4 exports 0 dependencies

Last updated 3 years agofrom:d65dbfa703. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 12 2025
R-4.5-winNOTEFeb 12 2025
R-4.5-macNOTEFeb 12 2025
R-4.5-linuxNOTEFeb 12 2025
R-4.4-winNOTEFeb 12 2025
R-4.4-macNOTEFeb 12 2025
R-4.3-winNOTEFeb 12 2025
R-4.3-macNOTEFeb 12 2025

Exports:getMinorMajorCopyNumberslistDataSetslistTumorFractionsloadCnRegionData

Dependencies:

Annotated data sets contained in the acnr package

M. Pierre-Jean, P. Neuvial

Rendered fromacnr.Rmdusingknitr::rmarkdownon Feb 12 2025.

Last update: 2016-12-15
Started: 2016-11-23

Autocorrelation plots

Morgane Pierre-Jean and Pierre Neuvial

Rendered fromAutocorrelationVignette.Rmdusingknitr::rmarkdownon Feb 12 2025.

Last update: 2016-12-14
Started: 2016-12-13