{
  "_id": "6a47b656e06c18f0a651ba4e",
  "Package": "acnr",
  "Type": "Package",
  "Title": "Annotated Copy-Number Regions",
  "Version": "0.3.2",
  "Date": "2017-01-09",
  "Author": "Morgane Pierre-Jean and Pierre Neuvial",
  "Maintainer": "Morgane Pierre-Jean <mpierrejean.pro@gmail.com>",
  "Description": "This data package provides SNP array data from different\ntypes of copy-number regions. These regions were identified\nmanually by the authors of the package and may be used to\ngenerate realistic data sets with known truth.",
  "License": "LGPL (>= 2.1)",
  "RoxygenNote": "5.0.1",
  "VignetteBuilder": "knitr",
  "URL": "https://github.com/mpierrejean/acnr",
  "BugReports": "https://github.com/mpierrejean/acnr/issues",
  "Repository": "https://mpierrejean.r-universe.dev",
  "Date/Publication": "2021-11-18 07:46:06 UTC",
  "RemoteUrl": "https://github.com/mpierrejean/acnr",
  "RemoteRef": "HEAD",
  "RemoteSha": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-03 13:14:10 UTC",
    "User": "root"
  },
  "_user": "mpierrejean",
  "_type": "src",
  "_file": "acnr_0.3.2.tar.gz",
  "_fileid": "https://r2.ropensci.org/fb5a327fdcdeb19f23e95a1bd9f21a5d416e1f97e3a40e01fd0a4d55c77c07f7",
  "_filesize": 7138209,
  "_sha256": "fb5a327fdcdeb19f23e95a1bd9f21a5d416e1f97e3a40e01fd0a4d55c77c07f7",
  "_expires": "2026-10-11T13:17:09.000Z",
  "_created": "2026-07-03T13:14:10.000Z",
  "_published": "2026-07-03T13:17:10.577Z",
  "_jobs": [
    {
      "job": 85007657923,
      "time": 141,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8067484164"
    },
    {
      "job": 85007657900,
      "time": 138,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8067483259"
    },
    {
      "job": 85007657921,
      "time": 94,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8067469248"
    },
    {
      "job": 85007657924,
      "time": 90,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8067468134"
    },
    {
      "job": 85007144414,
      "time": 174,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8067437209"
    },
    {
      "job": 85007657946,
      "time": 104,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8067472432"
    },
    {
      "job": 85007657943,
      "time": 86,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8067466585"
    },
    {
      "job": 85007657932,
      "time": 81,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8067465562"
    },
    {
      "job": 85007657922,
      "time": 81,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8067465151"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219",
  "_status": "success",
  "_upstream": "https://github.com/mpierrejean/acnr",
  "_commit": {
    "id": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
    "author": "Morgane Pierre-Jean <mpierrejean.pro@gmail.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "update e-mail address",
    "time": 1637221566
  },
  "_maintainer": {
    "name": "Morgane Pierre-Jean",
    "email": "mpierrejean.pro@gmail.com",
    "login": "mpierrejean",
    "description": "",
    "uuid": 11524264
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "R.utils",
      "role": "Suggests"
    },
    {
      "package": "xtable",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "mpierrejean",
  "_selfowned": true,
  "_usedby": 3,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "pneuvial",
      "count": 37,
      "uuid": 7895899
    },
    {
      "user": "mpierrejean",
      "count": 2,
      "uuid": 11524264
    }
  ],
  "_userbio": {
    "uuid": 11524264,
    "type": "user",
    "name": "Morgane Pierre-Jean",
    "followers": 3
  },
  "_downloads": {
    "count": 362,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/acnr"
  },
  "_devurl": "https://github.com/mpierrejean/acnr",
  "_searchresults": 22,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/acnr.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/mpierrejean/acnr",
  "_realowner": "mpierrejean",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.2.4",
      "date": "2014-11-19"
    },
    {
      "version": "1.0.0",
      "date": "2017-04-18"
    }
  ],
  "_exports": [
    "getMinorMajorCopyNumbers",
    "listDataSets",
    "listTumorFractions",
    "loadCnRegionData"
  ],
  "_help": [
    {
      "page": "acnr-package",
      "title": "Annotated Copy-Number Regions",
      "topics": [
        "acnr-package",
        "acnr"
      ]
    },
    {
      "page": "getMinorMajorCopyNumbers",
      "title": "Get minor and major copy number labels from region annotation labels",
      "topics": [
        "getMinorMajorCopyNumbers"
      ]
    },
    {
      "page": "GSE11976_CRL2324",
      "title": "Annotated copy-number regions from the GEO GSE11976 data set.",
      "topics": [
        "GSE11976_CRL2324"
      ]
    },
    {
      "page": "GSE13372_HCC1143",
      "title": "Annotated copy-number regions from the GEO GSE13372 data set.",
      "topics": [
        "GSE13372_HCC1143"
      ]
    },
    {
      "page": "GSE29172_H1395",
      "title": "Annotated copy-number regions from the GEO GSE29172 (and GSE26302) data sets.",
      "topics": [
        "GSE29172_H1395"
      ]
    },
    {
      "page": "listDataSets",
      "title": "List available data sets",
      "topics": [
        "listDataSets"
      ]
    },
    {
      "page": "listTumorFractions",
      "title": "List of available tumor fractions for a data set",
      "topics": [
        "listTumorFractions"
      ]
    },
    {
      "page": "loadCnRegionData",
      "title": "loadCnRegionData",
      "topics": [
        "loadCnRegionData"
      ]
    }
  ],
  "_readme": "https://github.com/mpierrejean/acnr/raw/HEAD/README.md",
  "_rundeps": [],
  "_vignettes": [
    {
      "source": "acnr.Rmd",
      "filename": "acnr.html",
      "title": "Annotated data sets contained in the acnr package",
      "author": "M. Pierre-Jean, P. Neuvial",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description of the annotated data sets",
        "Session information"
      ],
      "created": "2016-11-23 14:38:38",
      "modified": "2016-12-15 23:33:27",
      "commits": 2
    },
    {
      "source": "AutocorrelationVignette.Rmd",
      "filename": "AutocorrelationVignette.html",
      "title": "Autocorrelation plots",
      "author": "Morgane Pierre-Jean and Pierre Neuvial",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Autocorrelation plots",
        "Autocorrelation tests",
        "Discussion",
        "TODO",
        "Session information"
      ],
      "created": "2016-12-13 09:26:18",
      "modified": "2016-12-14 16:17:26",
      "commits": 2
    }
  ],
  "_score": 5.296665190261531,
  "_indexed": true,
  "_nocasepkg": "acnr",
  "_universes": [
    "mpierrejean"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.3.2",
      "date": "2026-07-03T13:16:23.000Z",
      "distro": "resolute",
      "commit": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
      "fileid": "https://r2.ropensci.org/8288b8a62577ace2f8c8bc07c0b3aacf6504b8b76f4723137c1245949efa6d39",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.3.2",
      "date": "2026-07-03T13:16:15.000Z",
      "distro": "resolute",
      "commit": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
      "fileid": "https://r2.ropensci.org/7ad05b13e343f550e7e36cba903a32dc206db33cbd6c69a8267935b6ce82fa67",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.3.2",
      "date": "2026-07-03T13:15:39.000Z",
      "commit": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
      "fileid": "https://r2.ropensci.org/44ef19ded3b3d9fb019e21108c4b7f26e93bd7aa070492ef63650a08fc61d29a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.3.2",
      "date": "2026-07-03T13:15:35.000Z",
      "commit": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
      "fileid": "https://r2.ropensci.org/def5d5fde6a44c78cb7034cba19205a6a8d5ae92ceb63a4016f8b31a5695122d",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.3.2",
      "date": "2026-07-03T13:16:07.000Z",
      "commit": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
      "fileid": "https://r2.ropensci.org/7b1432d5452c0889470da31a082ca47257cea905bf9892727ad0ec6894faed1f",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.3.2",
      "date": "2026-07-03T13:15:20.000Z",
      "commit": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
      "fileid": "https://r2.ropensci.org/645bff531eedfdbed62dfa7c2c895f2c9eca1e751b54627754f4cf3f1c4206a7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.3.2",
      "date": "2026-07-03T13:15:16.000Z",
      "commit": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
      "fileid": "https://r2.ropensci.org/5dae9465afb8a6b65ef7232a5b311f11837d77ed3f6a98f7568db5cdca08f4c7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.3.2",
      "date": "2026-07-03T13:15:16.000Z",
      "commit": "d65dbfa70315c6f8a2caa6f7077c4c19ce24190a",
      "fileid": "https://r2.ropensci.org/32f59f986c5af4688cb75ba19700bdd01ed82e38f00b50d09ae314eadba74003",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mpierrejean/actions/runs/28662756219"
    }
  ]
}