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Generating realistic data with known truth using the jointseg package
7 years ago
Citing jointseg | Setup | Affymetrix data | Illumina data | Session information | References
jointseg 1.0.2
M. Pierre-Jean, G. Rigaill, P. Neuvial
dataGeneration.Rmd
PSSeg: Parent-Specifc copy number segmentation
9 years ago
Preparing data to be segmented | Preprocessing | PSSeg segmentation using RBS | Initial segmentation and pruning | Plot segmented profile | Results evaluation | Session information | Citing jointseg | References
jointseg 1.0.2
M. Pierre-Jean, G. Rigaill, P. Neuvial
PSSeg.Rmd
Annotated data sets contained in the acnr package
10 years ago
Description of the annotated data sets | Session information
acnr 0.3.2
M. Pierre-Jean, P. Neuvial
acnr.Rmd
Autocorrelation plots
10 years ago
Introduction | Autocorrelation tests | Discussion | TODO | Session information
acnr 0.3.2
Morgane Pierre-Jean and Pierre Neuvial
AutocorrelationVignette.Rmd