Changes in version 0.3.2                        

  - Updated data set GSE13372_HCC1143 to make all regions have a
    comparable number of data points (0,2) was ~7x bigger than the other
    ones.

                        Changes in version 0.3.1                        

  - BUG FIX in data set GSE13372_HCC1143: tumor genotypes were
    mislabeled as normal (Issue #9)
  - BUG FIX in data set GSE11976_CRL2324: genotypes were in 0, 1, 2
    instead of 0, 1/2, 1.
  - Added a test to check the consistency of germline genotypes.
  - Added other tests to check the internal consistency of all data sets
    (colum names, germline data, region annotation) to address Issues #6
    and #8.
  - Removed tumor fractions 0.23, 0.45, and 0.47 for which the
    cellularity is clearly inconsistent with experimental results, see
    Table 3 in Staaf (2008).

                        Changes in version 0.3.0                        

  - Data sets are now stored in inst/extData.
  - Data sets are now documented individually.
  - Updated scripts for the preprocessing of data set GSE13372.
  - Now exporting 'betaT' and 'betaN' for data set GSE13372.
  - 12 tumor cellularities are now available for data set GSE11976.

                        Changes in version 0.2.8                        

  - Added functions 'listDataSets' and 'listTumorFractions'

                        Changes in version 0.2.7                        

  - Updated scripts for the preprocessing of data set GSE29172
  - Now exporting 'betaT' and 'betaN' for data set GSE29172
  - Renamed files from Affymetrix data sets

                        Changes in version 0.2.6                        

  - Moved to roxygen2 documentation using package 'Rd2roxygen'
  - Cleaned up DESCRIPTOIN
  - Passes R CMD check locally with one NOTE (long file paths)

                        Changes in version 0.2.5                        

  - Add a new dataSet GSE13372
  - Change directory structure in inst/exdata: now
    inst/exdata/dataSet/chipType
  - Save all files in '.rds'
  - Add a 0% dillution in 'GSE11976' dataset

                 Changes in version 0.2.4 (2014-11-19)                  

  - Used tools::resaveRdaFiles to compress data

                        Changes in version 0.2.3                        

  - Changed ‘Affymetrix’ data, package is now less than 5MB.

                        Changes in version 0.2.2                        

  - Added a mini-vignette.

                        Changes in version 0.2.1                        

  - Moved inst/testScripts/system/preprocessing to inst/preprocessing.

                        Changes in version 0.2.0                        

  - Changed ‘platform’ to ‘dataSet’.

                        Changes in version 0.1.7                        

  - Changed ‘Illumina’ to ‘GSE11976’ and ‘Affymetrix’ to ‘GSE29172’.

                        Changes in version 0.1.6                        

  - Bumped up version number to trigger build of 'jointSeg' by R-forge.

                        Changes in version 0.1.5                        

  - Added a succinct vignette.

                        Changes in version 0.1.4                        

  - Changed (1,2) region in Illumina Data.

                        Changes in version 0.1.3                        

  - Now 'c' is on the non-log scale for both Affy and Illumina.
  - In 'loadCnRegionData': more informative error message when desired
    tumor fraction is not available.

                        Changes in version 0.1.2                        

  - Added more regions for Illumina platform

                        Changes in version 0.1.1                        

  - Renamed 'inst/extData' to 'inst/extdata'

                        Changes in version 0.1.0                        

  - Created from package 'jointSeg'.